Examples of JSpecView integration with JSmol

These pages are a copy of those made by Prof. Robert J. Lancashire (The Department of Chemistry, University of the West Indies, Mona Campus, Kingston 7, Jamaica) and hosted at http://wwwchem.uwimona.edu.jm/spectra/jsmol/demos/

The copy was made on August 2025, with intent of preservation to demonstrate and document the procedure to include the spectrum visualizer JSpecView and its interaction with 3D molecular structure display.in JSmol.
Page code was adapted to use current version 16.3 of JSmol+SpecView rather than the original version at the UWI server.

You may visit the Jmol Wiki for details on implementing JSpecViewer in web pages like these. There is also a descriptive specification (pdf) of the extension of the JCAMP-DX format that allows one JDX file to contain both Jmol-readable 3D models and peak information.

Link to demo page JSpecView JSmol JSME Description
(all will open in new window)        
BX3.html ✅ ✅   B(III) species : Interpreted IR and Raman spectra for interactive Jmol/JSpecView display
C2Cl4.html ✅ ✅   tetrachloroethene C2Cl4 : Iinterpreted IR and Raman spectra for interactive Jmol/JSpecView display
C6_species.html ✅ ✅   C2 species : IR spectra and vibrational mode animations
C6_species0.html ✅ ✅   C2 species : IR spectra and vibrational mode animations
ClMeth.html ✅ ✅   Chloromethanes CH4, CH3Cl, CH2Cl2, CHCl3, CCl4 : IR and Raman spectra and vibrational mode animations
ClMethanes.html ✅ ✅   Chloromethanes CH2Cl2, CHCl3, liquid CH2Cl2 & CD2Cl3, CHCl3, CDCl3 : IR and Raman spectra and vibrational mode animations
ClMethanes0.html ✅ ✅   Chloromethanes CH2Cl2, CD2Cl3, CHCl3, CDCl3 : IR and Raman spectra and vibrational mode animations
Claniline.html ✅ ✅   Chloro-anilines : IR and 13CNMR spectra and vibrational mode animations
Clbenzaldehyde.html ✅ ✅   2-chlorobenzaldehyde : IR, HNMR and CNMR spectra and vibrational mode animations
Crtest.html ✅ ✅   Cr(III) complexes : UV/Visible spectra for several complexes; additionally, the colour of a solution of each is predicted
DCE.html
DCE0.html
DCE0a.html
DCE0b.html
DCE1.html
DCE_Sim.html
DCE_Sim1.html
DCE_Sim2.html
DCE_old.html
✅ ✅   dichloroethylene isomers : Infrared and Raman spectra
EA.html ✅ ✅   Ethanolamine : IR and Raman spectra
Etbenzoate.html ✅ ✅   Ethylbenzoate : IR, HNMR and CNMR spectra and vibrational mode animations
Expt12.html ✅ ✅   4-hydroxybenzoic acid and 4-acetoxybenzoic acid
H3C2F3.html ✅ ✅   1,1,1- and 1,1,2-trifluoroethane : IR and Raman spectra and vibrational mode animations
IRmodes.html   ✅   Infrared Spectroscopy and Modes of Vibrations
N2F2-orig.html
N2F2.html
N2F2R.html
N2F2R1.html
N2F2R2.html
N2F2T.html
N2F2a.html
✅ ✅   Dinitrogen difluoride : IR and Raman spectra and vibrational mode animations
NH3BH3.html ✅ ✅   Ammonia borane : IR and Raman spectra and vibrational mode animations
NMR_HCpredict.html ✅ ✅ ✅ JSpecView + JSME + nmrdb + NIH-Resolver demo
NMR_demo.html ✅ ✅   Aspirin and acetophenone : IR spectra and vibrational mode animations
P(CN)3_Sim.html ✅ ✅   P(CN)3 : IR and Raman spectra and vibrational mode animations
acetophenone.html
acetophenone1a.html
acetophenone2.html
✅ ✅   Acetophenone : IR, HNMR, CNMR and mass spectra and vibrational mode animations
aniline_acetanilide.html ✅ ✅   The synthesis of acetanilide from aniline can be monitored by IR.
aspirin.html ✅ ✅   Aspirin : HNMR and CNMR spectra and vibrational mode animations
cholac.html ✅ ✅   cholesteryl acetate : IR spectrum and vibrational mode animations
cinnamaldehyde.html ✅ ✅   Cinnamaldehyde : HNMR and CNMR spectra and vibrational mode animations
coffeeGC.html ✅ ✅   Components of coffee : Gas chromatography trace
coffeeGCMS.html ✅ ✅   Components of coffee : Gas chromatography trace and MS spectra
dce-2.html ✅ ✅   1,2-dichloroethylene : IR and Raman spectra and vibrational mode animations
dodecaneMS.html ✅ ✅   Dodecane : MS spectrum
nutmegGCMS.html ✅ ✅   Components of nutmeg : Gas chromatography trace and MS spectra
pimberryGCMS.html
pimentoGCMS.html
✅ ✅   Components of pimento (allspice) : Gas chromatography trace and MS spectra
preg-cosy.html ✅     COSY NMR spectrum
pyrazine.html ✅ ✅   Pyrazine : IR and Raman spectra and vibrational mode animations
synfuelGCMS.html ✅ ✅   Synthetic fuel :Gas chromatography trace and MS spectra
t-butylOH.html ✅ ✅   The synthesis of t-butyl chloride from t-butyl alcohol monitored by IR
test1jsv_mol.html ✅ ✅   Hexane and cyclohexane derivatives : IR spectra and vibrational mode animations
test_Drexel.html
testjsv.html
✅     1-vinylpyrrolidin-2-one and hexanol (?) : HNMR and 2D NMR
vinylpyrrolidinone.html ✅ ✅   1-vinylpyrrolidin-2-one : IR, HNMR, CNMR and mass spectra and vibrational mode animations

CrVis.html ✅     Several Cr(III) complexes : VIS spectra and prediction of the colour in solution
Crexpt_TS.html ✅ ✅   Several Cr(III) complexes : structure, exploration of peak energies in VIS spectra; estimation of Δ/B' and Magnetic Moment